species:   Fugra
pid:       PID0891
parent:    FgmilR-7dps-110
paralog:   
locus:     NC_026477.1:7460991-7461210
matures:   ['UUACACGGAGAUCACAUAACUC', 'CCUAUGGGGUUUGUGUCAUC']
srr:       SRR6516245
genome:    /Users/jax/+Genomes/Fungal_genomes/Fugra.GCF_000240135.3_ASM24013v3_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516245.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516245.cram NC_026477.1:7460991-7461210

0 out of bounds
2 alignments
1 proper strand
0 stranded perfect matches

 ************************                                                                                                                                                                            ********************** 
GGAUUACACGGAGAUCACAUAACUCUGACAUCAUGCAGGCUUCAGGUGUGGAAAAGCCUGCGAAUAAUAGAGAUUUCAUUCGGGGCGGUGCUGGGCCAACCACCGGCCUUAAGCACAGGACAAGCAUCAGAAACAACGCCAUUUACAGUUCCAGAUGGUCCAGAACCAUGCACACCUGAAUUUACAUCCAUGUCGUCGACCUAUGGGGUUUGUGUCAUCC
((((.(((((((..((.((((..((.(((..((((.....((((((((((.(...((((.(((((.(........).))))))))).((((((((((.......)))))..))))).((((...((((.(.(((.............))).).)))))))).......).))))))))))........))))..)))))..)))))).))))))).))))
---UUACACGGAGAUCACAUAACUC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=0 c
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCUAUGGGGUUUGUGUCAUC- l=20 a=0 c*
---UUACACGGAGAUCACAUAACUC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=22 a=0 ma
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCUAUGGGGUUUGUGUCAUC- l=20 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-100110011100
fn-001
